The applications listed here are available for use in the Discovery Environment and are documented in: Discovery Environment Manual.

Discovery Environment Applications List

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FileDescription
2-asm-falcon/Folder of final assembly
2-asm-falcon/p_ctg.faPrimary contigs
2-asm-falcon/a_ctg.faAssociated contigs
preads/Corrected preads that can be used for re-assembly if the EC and FC parameters do not change.
*.errError log from your job
*.outOutput log from your job
*.pidJob process id
input.fofnFiles given as input to FALCON
job.cfgFALCON job parameters
preads4falcon.fasta.gzCompressed preads file for archiving
pypeflow.logpypeFLOW log
sge_log.tar.gzTarball of job logs for each individual task

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