This box searches only this space. The box at the upper right searches the entire iPlant wiki.

Skip to end of metadata
Go to start of metadata

Supplemental Resources for Field-based High Throughput Phenotyping Workshop

iPlant presentation, April 9, 2014

Maricopa Agricultural Center

Upload data via DE

some sample files to upload from URL:

ftp://ftp.ensembl.org/pub/release-67/fasta/canis_familiaris/dna/Canis_familiaris.BROADD2.67.dna_rm.chromosome.MT.fa.gz

http://palea.cgrb.oregonstate.edu/viewsvn/Poc/trunk/associations/po_anatomy_gene_Petunia_sgn.assoc?revision=1592

Workflow tutorial

Tutorial slides

Handout

YouTube video

input data for example workflow: 

Community Data > iplant_training > intro_phylogenetics > 01_input_data > atpB.fa

Uploading Data

?iDrop Destop

Using iDrop Desktop to sync files between the Data Store and your desktop

YouTube video

iCommands

?Using iCommands to manage data

YouTube video

References:

iPlant home page: http://www.iplantcollaborative.org/

?Getting Started with CyVerse Home

?Downloading and Uploading Data

?Using iCommands

Discovery Environment: http://preview.iplantcollaborative.org/de/

Discovery Environment Manual

Atmosphere: https://atmo.iplantcollaborative.org/login/

Atmosphere Manual

Bisque: http://bisque.iplantcollaborative.org

Bisque Manual

  • No labels